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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802087.1_cds_XP_016478032.1_6941
CDS Infomation

[gene=LOC107799430] [db_xref=GeneID:107799430] [protein=E3 ubiquitin protein ligase DRIP2-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478032.1] [location=join(35469..35592,36490..36589,38171..38501,38627..39075,39186..39236,43314..43386,44271..>44350)] [gbkey=CDS]
Sequence

ATGAGAAATATGGCGAATCAAGTGGTGAAAGTGAAGAGAGATAGAATTGCGGCATGCATA
ACATGCCCTCTTTGCCATAAGCTCTTTAGAGATGCCACTACTGTTTCCGAATGTCTTCAC
ACGTTTTGCAGGAAATGCATCTATAAGAAGCTCTCTGATGAAGAAACGGAATGCTGCCCA
ATATGCAATATTGACTTGGGTTGTGTCCCATTAGAGAAATTGAGGCCAGATCATAATCTG
CAAGATGTAAGAGCAAAGATATTCCCTTACAAGAGGCAAAAGGTGCAGGCACCTGAAGTT
GTGCCTCCGATTGCCCTTCCAGTCAGGAGAAAAGAGAGATCACTATCTTCACTAGTGGTC
AGCACTCCAAGAGTATCAACACAGACTGGAACAACAGGAAGAAGATCAAAATCAGTGGCA
AGAAAAGCATTACGAGGCTCCACCTTTTCTGTTGAGAAACCTATCAAGAAAGAGGAAAAA
ATATCTGGAGAAGATCAACTGGATAGCTCTAGTTCACCTGAGACTTTGACCAAGTTCACT
CAGAACATAAGGCAGAATTCTTCCAGTGCTGAGCTTTCTGGCCAACCCACGCCTGATAAC
GAAACGGAGAATGGCACGGACCAGTGGGAAGGTAAAGTTGATTTATGGAAACCTTTGAAC
TGTTTGGTCGAAGTAGCAAACCAGAGCAAGTCTGCGAAGTTTACTTCCCAAGGTTCTACT
GCTAAATCAGAATGCCTGCATTCCCTTGGCAATGAAGCTCATGTCCGTAAAACTAAAGTG
AAAAAACGTGGACTGAAAATCAAAGTTCACGATGACAAGAATAACTGCGGAGCTTCTCAT
TTGGGATCAGATAAAACTAAAAAATTGCGAAGGAATCGCCAAAAGAAGGCAACAGAATTT
GGAGAATCTAGTATTTCACCACAAACTGTGCTGGATGCAATCACTACCAAATGTGAAAGA
AGGATTAATCCAATTTGGTTCTCATTAGTGGCCGCTGAAGATCAGGAGGGAGGTGCACTC
TTGCCCCAGATTTCTGCAAGTTACTTGAGAATAAAGGATGGCAATATTCCCGTTTCTTTC
ATCCAAAAGTATCTGATGAGGAAGTTAGATCTTATGAGCGAAGATGAGGTTGAAGTTAGA
TGTATGGGTCAGTTGATAGTCCCCACTTTACAACTGAATACTTTGGTAGATATGTGGCTT
GAAACTAC

Peptide Sequence

PEP ID

XP_016478032.1
PEP Infomation

PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Nicotiana tabacum]
Sequence

MRNMANQVVKVKRDRIAACITCPLCHKLFRDATTVSECLHTFCRKCIYKKLSDEETECCP
ICNIDLGCVPLEKLRPDHNLQDVRAKIFPYKRQKVQAPEVVPPIALPVRRKERSLSSLVV
STPRVSTQTGTTGRRSKSVARKALRGSTFSVEKPIKKEEKISGEDQLDSSSSPETLTKFT
QNIRQNSSSAELSGQPTPDNETENGTDQWEGKVDLWKPLNCLVEVANQSKSAKFTSQGST
AKSECLHSLGNEAHVRKTKVKKRGLKIKVHDDKNNCGASHLGSDKTKKLRRNRQKKATEF
GESSISPQTVLDAITTKCERRINPIWFSLVAAEDQEGGALLPQISASYLRIKDGNIPVSF
IQKYLMRKLDLMSEDEVEVRCMGQLIVPTLQLNTLVDMWLETTNSERVPAIIGSSAKDFV
MVLVYARKVPGLPAS

Transcript Sequence

Gene sequence data has not been registered.